Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconolactonase | PMI12_05389 | Not Available | + | 5663104 - 5664057 | 34540.2 |
| hypothetical protein | PMI12_05390 | Not Available | + | 5664326 - 5664583 | 9478.41 |
| lactoylglutathione lyase-like lyase | PMI12_05391 | Not Available | - | 5664632 - 5665009 | 13799.5 |
| signal transduction histidine kinase | PMI12_05392 | Not Available | - | 5665989 - 5667188 | 43328.3 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_05393 | Not Available | - | 5667204 - 5667926 | 26634.4 |
| hypothetical protein | PMI12_05394 | Not Available | - | 5668044 - 5668904 | 29362.8 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_05395 | Not Available | - | 5668998 - 5669485 | 18162.1 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_05396 | Not Available | - | 5669482 - 5670251 | 27665.6 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_05397 | Not Available | - | 5670265 - 5671185 | 32872.4 |
| protein of unknown function (duf1841) | PMI12_05398 | Not Available | - | 5671241 - 5671675 | 16261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.