Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| permease | PMI12_05359 | Not Available | - | 5632106 - 5633506 | 48522.6 |
| transcriptional regulator | PMI12_05360 | Not Available | - | 5633585 - 5634586 | 36858.8 |
| transposase | PMI12_05361 | Not Available | - | 5634824 - 5636272 | 55290.4 |
| aspartate/tyrosine/aromatic aminotransferase | PMI12_05362 | Not Available | + | 5636454 - 5637626 | 42599.2 |
| eama-like transporter family | PMI12_05363 | Not Available | + | 5637709 - 5638380 | 23158.3 |
| glucose-1-phosphate adenylyltransferase | PMI12_05364 | Not Available | - | 5638740 - 5640047 | 48352.0 |
| glycogen debranching enzyme glgx | PMI12_05365 | Not Available | - | 5640135 - 5642213 | 75095.4 |
| transposase | PMI12_05366 | Not Available | - | 5642669 - 5643619 | 35486.5 |
| hypothetical protein | PMI12_05367 | Not Available | - | 5643717 - 5643793 | 2944.49 |
| rhs family protein | PMI12_05368 | Not Available | - | 5644962 - 5645371 | 15148.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.