Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | PMI12_00512 | Not Available | - | 510588 - 511025 | 15708.3 |
| hypothetical protein | PMI12_00513 | Not Available | + | 511155 - 511883 | 25224.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | PMI12_00514 | Not Available | - | 511900 - 512823 | 33086.3 |
| succinyl-coa synthetase, beta subunit | PMI12_00515 | Not Available | + | 513029 - 514195 | 41308.0 |
| succinyl-coa synthetase, alpha subunit | PMI12_00516 | Not Available | + | 514206 - 515099 | 31077.7 |
| integral membrane protein, yjbe family | PMI12_00517 | Not Available | + | 515219 - 515902 | 23959.3 |
| serine/threonine protein phosphatase | PMI12_00518 | Not Available | + | 515952 - 516719 | 27252.5 |
| fha domain-containing protein | PMI12_00519 | Not Available | + | 516807 - 517460 | 22769.5 |
| putative transmembrane sensor domain protein | PMI12_00520 | Not Available | + | 517512 - 519764 | 80371.4 |
| metal-dependent hydrolase, beta-lactamase superfamily iii | PMI12_00521 | Not Available | + | 519794 - 520597 | 29291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
