Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like enzyme, predicted cysteine protease | PMI12_05339 | Not Available | Positive | 5612213 - 5613184 | 35524.6 |
| putative translation initiation inhibitor, yjgf family | PMI12_05340 | Not Available | Positive | 5613181 - 5613639 | 15673.0 |
| sugar phosphate permease | PMI12_05341 | Not Available | Negative | 5613710 - 5615074 | 49292.9 |
| hydantoin racemase | PMI12_05342 | Not Available | Negative | 5615091 - 5615750 | 22756.5 |
| sugar phosphate permease | PMI12_05343 | Not Available | Negative | 5615770 - 5617224 | 51190.6 |
| transcriptional regulator | PMI12_05344 | Not Available | Negative | 5617467 - 5618309 | 30678.4 |
| transcriptional regulator | PMI12_05345 | Not Available | Negative | 5618356 - 5619381 | 36100.4 |
| lactate dehydrogenase-like oxidoreductase | PMI12_05346 | Not Available | Negative | 5619506 - 5620495 | 35095.3 |
| sugar kinase, ribokinase | PMI12_05347 | Not Available | Negative | 5620501 - 5621454 | 33770.0 |
| sugar phosphate isomerase/epimerase | PMI12_05348 | Not Available | Negative | 5621469 - 5622212 | 26423.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.