Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_05329 | Not Available | + | 5600290 - 5600994 | 26084.5 |
| periplasmic glycine betaine/choline-binding lipoprotein of an abc-type transport system | PMI12_05330 | Not Available | - | 5601285 - 5602838 | 55109.1 |
| hypothetical protein | PMI12_05331 | Not Available | + | 5602950 - 5604014 | 39370.5 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI12_05332 | Not Available | - | 5604016 - 5605563 | 54901.8 |
| abc-type multidrug transport system, permease component | PMI12_05333 | Not Available | - | 5605579 - 5606697 | 40417.1 |
| abc-type multidrug transport system, permease component | PMI12_05334 | Not Available | - | 5606709 - 5607839 | 40578.8 |
| abc-type multidrug transport system, atpase component | PMI12_05335 | Not Available | - | 5607836 - 5609602 | 64195.2 |
| hypothetical protein | PMI12_05336 | Not Available | - | 5609712 - 5609837 | 4878.71 |
| hypothetical protein | PMI12_05337 | Not Available | - | 5609923 - 5610312 | 14842.5 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_05338 | Not Available | + | 5611360 - 5612187 | 29023.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.