Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase, diketogulonate reductase | PMI12_05279 | Not Available | Negative | 5546558 - 5547382 | 29429.3 |
| tartrate dehydrogenase | PMI12_05280 | Not Available | Positive | 5547728 - 5548810 | 39259.9 |
| hypothetical protein | PMI12_05281 | Not Available | Negative | 5548936 - 5549008 | 2778.24 |
| hypothetical protein | PMI12_05282 | Not Available | Negative | 5549030 - 5549371 | 13129.0 |
| hypothetical protein | PMI12_05283 | Not Available | Negative | 5549368 - 5551553 | 74285.3 |
| hypothetical protein | PMI12_05284 | Not Available | Negative | 5551554 - 5551619 | 2250.66 |
| hypothetical protein | PMI12_05285 | Not Available | Negative | 5551616 - 5552089 | 17695.3 |
| glutamate-1-semialdehyde-2,1-aminomutase | PMI12_05286 | Not Available | Negative | 5552259 - 5553545 | 45538.9 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | PMI12_05287 | Not Available | Negative | 5553673 - 5554635 | 34501.1 |
| rubredoxin | PMI12_05288 | Not Available | Positive | 5554747 - 5554917 | 6256.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.