Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyisourate hydrolase | PMI12_05259 | Not Available | Negative | 5523727 - 5524077 | 12639.9 |
| transcriptional regulator | PMI12_05260 | Not Available | Positive | 5524160 - 5524834 | 24834.1 |
| putative urate catabolism protein | PMI12_05261 | Not Available | Positive | 5524841 - 5525803 | 36615.3 |
| amidase, hydantoinase/carbamoylase family | PMI12_05262 | Not Available | Positive | 5525800 - 5527578 | 64701.1 |
| acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase | PMI12_05263 | Not Available | Positive | 5527599 - 5528825 | 44041.7 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI12_05264 | Not Available | Negative | 5528832 - 5530862 | 72415.5 |
| hypothetical protein | PMI12_05265 | Not Available | Positive | 5531028 - 5532758 | 61988.7 |
| hypothetical protein | PMI12_05266 | Not Available | Negative | 5532773 - 5533258 | 17463.8 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_05267 | Not Available | Negative | 5533433 - 5534119 | 25187.8 |
| histidine kinase with hamp domain containing protein | PMI12_05268 | Not Available | Negative | 5534116 - 5535768 | 60173.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.