Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_00482 | Not Available | + | 482304 - 483437 | 39836.9 |
| proline racemase | PMI12_00483 | Not Available | + | 483452 - 484387 | 32755.7 |
| glycine/d-amino acid oxidase, deaminating | PMI12_00484 | Not Available | + | 484399 - 485502 | 39030.6 |
| hypothetical protein | PMI12_00485 | Not Available | + | 485499 - 485747 | 8674.69 |
| nad(fad)-dependent dehydrogenase | PMI12_00486 | Not Available | + | 485744 - 487021 | 44005.9 |
| transcriptional regulator | PMI12_00487 | Not Available | + | 487018 - 487716 | 25503.8 |
| fatty acid desaturase | PMI12_00488 | Not Available | + | 487801 - 488739 | 35711.6 |
| putative permease, dmt superfamily | PMI12_00489 | Not Available | - | 488727 - 489614 | 30875.8 |
| transcriptional regulator | PMI12_00490 | Not Available | + | 489696 - 490583 | 32231.7 |
| hypothetical protein | PMI12_00491 | Not Available | - | 490619 - 490933 | 11645.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.