Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde-3-phosphate dehydrogenase, type i | PMI12_00452 | Not Available | Positive | 451917 - 452918 | 36225.6 |
| hypothetical protein | PMI12_00453 | Not Available | Negative | 453213 - 453521 | 10872.1 |
| tartrate dehydrogenase | PMI12_00454 | Not Available | Positive | 453782 - 454873 | 39399.3 |
| hypothetical protein | PMI12_00455 | Not Available | Positive | 454942 - 455949 | 34853.5 |
| hypothetical protein | PMI12_00456 | Not Available | Positive | 456069 - 456359 | 10584.9 |
| pirin-related protein | PMI12_00457 | Not Available | Negative | 456374 - 457444 | 38735.6 |
| putative lactoylglutathione lyase | PMI12_00458 | Not Available | Negative | 457573 - 457995 | 15539.5 |
| hypothetical protein | PMI12_00459 | Not Available | Positive | 458171 - 459715 | 55993.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PMI12_00460 | Not Available | Negative | 459737 - 460213 | 17440.9 |
| transcriptional regulator | PMI12_00461 | Not Available | Negative | 460254 - 461180 | 33321.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.