Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monoamine oxidase | PMI12_00442 | Not Available | Positive | 433753 - 435363 | 57853.6 |
| large extracellular alpha-helical protein | PMI12_00443 | Not Available | Positive | 435632 - 441634 | 218107.0 |
| penicillin-binding protein 1c | PMI12_00444 | Not Available | Positive | 441775 - 444063 | 82833.6 |
| hypothetical protein | PMI12_00445 | Not Available | Positive | 444134 - 445486 | 48485.5 |
| tautomerase enzyme | PMI12_00446 | Not Available | Negative | 445529 - 445936 | 15224.0 |
| transcriptional regulator | PMI12_00447 | Not Available | Positive | 446092 - 447036 | 34514.4 |
| xaa-pro aminopeptidase | PMI12_00448 | Not Available | Negative | 446978 - 448375 | 51420.1 |
| nucleoside-diphosphate-sugar pyrophosphorylase family protein | PMI12_00449 | Not Available | Negative | 448372 - 449085 | 25349.4 |
| s-adenosylmethionine decarboxylase proenzyme | PMI12_00450 | Not Available | Negative | 449231 - 449605 | 13358.1 |
| transketolase | PMI12_00451 | Not Available | Positive | 449752 - 451857 | 75337.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.