Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_00422 | Not Available | - | 407676 - 408170 | 18831.8 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | PMI12_00423 | Not Available | - | 408247 - 409650 | 49610.3 |
| phosphoglycerate dehydrogenase-like oxidoreductase | PMI12_00424 | Not Available | - | 409815 - 410750 | 33856.8 |
| putative acyltransferase | PMI12_00425 | Not Available | - | 410870 - 411745 | 31048.4 |
| glycine/d-amino acid oxidase, deaminating | PMI12_00426 | Not Available | + | 412346 - 413638 | 46726.7 |
| abc-type dipeptide transport system, periplasmic component | PMI12_00427 | Not Available | + | 413703 - 415325 | 58533.3 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_00428 | Not Available | + | 415348 - 416304 | 33876.6 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_00429 | Not Available | + | 416315 - 417229 | 31542.1 |
| atpase component of various abc-type transport systems with duplicated atpase domain | PMI12_00430 | Not Available | + | 417347 - 418972 | 58558.1 |
| tartrate dehydrogenase | PMI12_00431 | Not Available | + | 418969 - 420072 | 40245.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.