Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type cobalt transport system, atpase component | PMI12_00412 | Not Available | - | 398400 - 399146 | 27462.6 |
| pep phosphonomutase-like enzyme | PMI12_00413 | Not Available | - | 399189 - 400082 | 30900.8 |
| zinc carboxypeptidase | PMI12_00414 | Not Available | - | 400125 - 401834 | 64349.0 |
| hypothetical protein | PMI12_00415 | Not Available | + | 401933 - 402646 | 25340.1 |
| hypothetical protein | PMI12_00416 | Not Available | + | 402661 - 403059 | 13939.6 |
| haloacid dehalogenase superfamily enzyme, subfamily ia | PMI12_00417 | Not Available | + | 403198 - 403896 | 25615.1 |
| 2-haloalkanoic acid dehalogenase, type ii | PMI12_00418 | Not Available | + | 404008 - 404679 | 25299.3 |
| glycine/d-amino acid oxidase, deaminating | PMI12_00419 | Not Available | - | 404719 - 405873 | 41668.1 |
| nad(fad)-dependent dehydrogenase | PMI12_00420 | Not Available | - | 405870 - 407270 | 49445.5 |
| hypothetical protein | PMI12_00421 | Not Available | - | 407276 - 407656 | 13459.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.