Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00392 | Not Available | + | 380769 - 381209 | 17076.6 |
| hypothetical protein | PMI12_00393 | Not Available | + | 381176 - 381393 | 8019.73 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_00394 | Not Available | - | 381493 - 382401 | 31634.6 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_00395 | Not Available | - | 382406 - 383410 | 36522.9 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_00396 | Not Available | - | 383461 - 385140 | 60568.4 |
| nad/nadp transhydrogenase beta subunit | PMI12_00397 | Not Available | - | 385241 - 386668 | 49617.7 |
| nad/nadp transhydrogenase alpha subunit | PMI12_00398 | Not Available | - | 386665 - 386994 | 11433.5 |
| nad/nadp transhydrogenase alpha subunit | PMI12_00399 | Not Available | - | 387019 - 388149 | 38699.0 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_00400 | Not Available | + | 388646 - 389302 | 24814.0 |
| hypothetical protein | PMI12_00401 | Not Available | + | 389401 - 389835 | 16059.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.