Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00362 | Not Available | + | 357915 - 358328 | 14913.8 |
| protein of unknown function (duf2933) | PMI12_00363 | Not Available | + | 358353 - 358589 | 8743.69 |
| hypothetical protein-s-isoprenylcysteine methyltransferase | PMI12_00364 | Not Available | + | 358570 - 359244 | 25425.9 |
| hypothetical protein | PMI12_00365 | Not Available | + | 359267 - 359497 | 8291.44 |
| copper/silver-translocating p-type atpase | PMI12_00366 | Not Available | + | 359558 - 361864 | 80494.4 |
| putative copper-binding protein | PMI12_00367 | Not Available | - | 361900 - 362400 | 17922.6 |
| hypothetical protein | PMI12_00368 | Not Available | - | 362397 - 362570 | 6366.72 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_00369 | Not Available | - | 362678 - 363367 | 25009.3 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_00370 | Not Available | - | 363367 - 364104 | 27204.8 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_00371 | Not Available | - | 364164 - 365090 | 33849.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.