Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00342 | Not Available | - | 338541 - 339125 | 21675.4 |
| chrd domain-containing protein | PMI12_00343 | Not Available | + | 339210 - 339659 | 15093.2 |
| putative esterase of the alpha-beta hydrolase superfamily | PMI12_00344 | Not Available | + | 339798 - 340928 | 41245.9 |
| acetoacetate decarboxylase | PMI12_00345 | Not Available | + | 341006 - 341755 | 27557.4 |
| 3-hydroxybutyrate dehydrogenase | PMI12_00346 | Not Available | + | 341802 - 342584 | 27448.3 |
| transcriptional regulator | PMI12_00347 | Not Available | - | 342690 - 343646 | 35289.6 |
| putative radical sam protein ygiq | PMI12_00348 | Not Available | + | 343788 - 346190 | 88336.9 |
| hypothetical protein | PMI12_00349 | Not Available | + | 346297 - 347157 | 31874.9 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_00350 | Not Available | - | 347159 - 348040 | 30725.1 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_00351 | Not Available | + | 348190 - 349092 | 32674.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.