Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coiled-coil domain protein containing protein | PMI12_00302 | Not Available | + | 301654 - 301857 | 7783.33 |
| dna helicase, rad3 | PMI12_00303 | Not Available | + | 301854 - 303932 | 75417.0 |
| beta-barrel assembly machine subunit bamd | PMI12_00304 | Not Available | - | 303940 - 304746 | 30165.6 |
| pseudouridine synthase, rlua family | PMI12_00305 | Not Available | + | 304797 - 305795 | 36129.6 |
| segregation and condensation protein b | PMI12_00306 | Not Available | + | 305924 - 306772 | 30533.6 |
| pseudouridine synthase family protein | PMI12_00307 | Not Available | + | 306769 - 308577 | 64853.9 |
| nucleoside diphosphate kinase | PMI12_00308 | Not Available | + | 308731 - 309156 | 15181.2 |
| 23s rrna methyltransferase | PMI12_00309 | Not Available | + | 309178 - 310326 | 42473.2 |
| type iv pilus biogenesis/stability protein pilw | PMI12_00310 | Not Available | + | 310331 - 311185 | 31378.1 |
| hypothetical protein | PMI12_00311 | Not Available | + | 311178 - 312143 | 32480.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.