Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose/sorbosone dehydrogenase | PMI12_00291 | Not Available | + | 288437 - 289567 | 40440.6 |
| putative esterase | PMI12_00292 | Not Available | - | 289583 - 290380 | 28504.3 |
| nicotinamidase-like amidase | PMI12_00293 | Not Available | + | 290513 - 291115 | 21915.3 |
| propionate--coa ligase | PMI12_00294 | Not Available | + | 291251 - 293164 | 69283.1 |
| 2-oxoglutarate dehydrogenase, e1 component | PMI12_00296 | Not Available | + | 293343 - 296219 | 106206.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase | PMI12_00297 | Not Available | + | 296275 - 297534 | 43585.7 |
| dihydrolipoamide dehydrogenase | PMI12_00298 | Not Available | + | 297553 - 298983 | 50351.5 |
| putative atpase | PMI12_00299 | Not Available | + | 298997 - 300097 | 42237.0 |
| hypothetical protein | PMI12_00300 | Not Available | + | 300094 - 300747 | 24587.7 |
| serine/threonine protein phosphatase | PMI12_00301 | Not Available | - | 300774 - 301547 | 28195.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.