Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative endonuclease | PMI12_03990 | Not Available | - | 4137675 - 4138739 | 39409.2 |
| Hypothetical protein | PMI12_03991 | Not Available | - | 4138874 - 4139821 | 34580.4 |
| Hypothetical protein | PMI12_03992 | Not Available | - | 4139952 - 4140299 | 12767.4 |
| Hypothetical protein | PMI12_03993 | Not Available | - | 4140351 - 4140767 | 13543.1 |
| Attr | Not Available | Not Available | + | 4144539 - 4144551 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 57 - 169 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 299 - 3170 | Not Available |
| type ii secretory pathway, component hofq | PMI12_00003 | Not Available | - | 1 - 554 | 19559.6 |
| hypothetical protein | PMI12_00004 | Not Available | - | 592 - 741 | 5248.68 |
| hypothetical protein | PMI12_00005 | Not Available | + | 1015 - 1143 | 4385.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.