Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein | PMI12_00221 | Not Available | + | 212955 - 214838 | 68206.1 |
| arabinose efflux permease family protein | PMI12_00222 | Not Available | + | 214867 - 216276 | 50348.1 |
| putative dithiol-disulfide isomerase involved in polyketide biosynthesis | PMI12_00223 | Not Available | + | 216323 - 217006 | 25076.5 |
| hypothetical protein | PMI12_00224 | Not Available | + | 217125 - 218687 | 57553.6 |
| hypothetical protein | PMI12_00225 | Not Available | + | 218760 - 219971 | 43350.8 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | PMI12_00226 | Not Available | + | 220043 - 221167 | 40367.5 |
| hypothetical protein | PMI12_00227 | Not Available | - | 221533 - 221712 | 6503.09 |
| hypothetical protein | PMI12_00228 | Not Available | + | 222911 - 223348 | 15286.7 |
| transposase, is30 family | PMI12_00229 | Not Available | + | 224572 - 225336 | 28915.5 |
| putative had superfamily hydrolase | PMI12_00230 | Not Available | - | 225418 - 225747 | 12118.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.