Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative permease | PMI12_00185 | Not Available | - | 192522 - 193424 | 31163.4 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase | PMI12_00186 | Not Available | + | 193621 - 194412 | 28472.2 |
| hypothetical protein | PMI12_00187 | Not Available | + | 194790 - 194984 | 6444.86 |
| rhs repeat-associated core domain protein containing protein | PMI12_00204 | Not Available | + | 196268 - 197350 | 40482.8 |
| hypothetical protein | PMI12_00205 | Not Available | + | 197813 - 197992 | 6575.8 |
| abc-type sugar transport system, periplasmic component | PMI12_00206 | Not Available | + | 198124 - 199134 | 34411.7 |
| permease component of ribose/xylose/arabinose/galactoside abc-type transporters | PMI12_00207 | Not Available | + | 199157 - 200116 | 32842.2 |
| abc-type sugar transport system, atpase component | PMI12_00208 | Not Available | + | 200116 - 200913 | 28679.4 |
| transcriptional regulator/sugar kinase | PMI12_00209 | Not Available | + | 200906 - 202129 | 43190.8 |
| hypothetical protein | PMI12_00210 | Not Available | - | 202146 - 203153 | 34960.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.