Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-barrel assembly machine subunit bama | PMI12_00175 | Not Available | + | 180378 - 182780 | 87957.4 |
| hypothetical protein | PMI12_00176 | Not Available | + | 182798 - 182956 | 5499.51 |
| signal transduction histidine kinase | PMI12_00177 | Not Available | + | 183385 - 184968 | 57855.8 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_00178 | Not Available | + | 184965 - 185663 | 26017.2 |
| acyl-coa dehydrogenase | PMI12_00179 | Not Available | - | 185688 - 186905 | 46087.8 |
| nudix family protein | PMI12_00180 | Not Available | + | 186950 - 188368 | 50616.4 |
| putative membrane protein, tigr01666 | PMI12_00181 | Not Available | + | 188417 - 190627 | 79193.5 |
| hypothetical protein | PMI12_00182 | Not Available | + | 190741 - 191058 | 10766.7 |
| ftsh-interacting integral membrane protein | PMI12_00183 | Not Available | + | 191235 - 191933 | 24576.7 |
| rrf2 family protein, putative transcriptional regulator | PMI12_00184 | Not Available | + | 191956 - 192498 | 19433.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.