Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type cobalamin/fe3+-siderophore transport system, atpase component | PMI12_01012 | Not Available | Negative | 1030528 - 1031310 | 28427.1 |
| abc-type fe3+-siderophore transport system, permease component | PMI12_01013 | Not Available | Negative | 1031307 - 1032332 | 34571.1 |
| abc-type fe3+-hydroxamate transport system, periplasmic component | PMI12_01014 | Not Available | Negative | 1032329 - 1033198 | 31004.7 |
| adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase | PMI12_01015 | Not Available | Negative | 1033195 - 1033794 | 21561.4 |
| cobyrinic acid a,c-diamide synthase | PMI12_01016 | Not Available | Negative | 1033778 - 1035115 | 46820.3 |
| outer membrane cobalamin receptor protein | PMI12_01017 | Not Available | Negative | 1035172 - 1037088 | 69005.7 |
| chloride channel protein eric | PMI12_01019 | Not Available | Positive | 1037491 - 1039212 | 60247.9 |
| hypothetical protein | PMI12_01020 | Not Available | Positive | 1039316 - 1039540 | 8297.83 |
| hypothetical protein | PMI12_01021 | Not Available | Positive | 1039537 - 1039869 | 11411.8 |
| putative permease | PMI12_01022 | Not Available | Positive | 1040163 - 1040990 | 28189.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.