Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type fe3+ transport system, periplasmic component | PMI12_00992 | Not Available | Positive | 1012113 - 1013192 | 38880.7 |
| abc-type spermidine/putrescine transport system, permease component i | PMI12_00993 | Not Available | Positive | 1013198 - 1014019 | 28520.5 |
| tigr00725 family protein | PMI12_00994 | Not Available | Positive | 1013970 - 1014518 | 18285.3 |
| amp nucleosidase | PMI12_00995 | Not Available | Positive | 1014627 - 1016153 | 56971.0 |
| hypothetical protein | PMI12_00996 | Not Available | Positive | 1016279 - 1017289 | 34925.9 |
| hypothetical protein | PMI12_00997 | Not Available | Positive | 1017401 - 1018408 | 34976.5 |
| putative transcriptional regulator | PMI12_00998 | Not Available | Negative | 1018421 - 1019113 | 24931.8 |
| cytochrome p450 | PMI12_00999 | Not Available | Positive | 1019196 - 1020380 | 41660.1 |
| pyridoxamine 5'-phosphate oxidase-related, fmn binding protein | PMI12_01000 | Not Available | Negative | 1020338 - 1021339 | 35872.4 |
| glutathione s-transferase | PMI12_01001 | Not Available | Negative | 1021336 - 1021986 | 23644.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.