Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator | PMI12_00982 | Not Available | Negative | 1001378 - 1001701 | 11733.4 |
| zn-dependent hydrolase, glyoxylase | PMI12_00983 | Not Available | Positive | 1001777 - 1002688 | 33420.5 |
| phosphoenolpyruvate synthase/pyruvate phosphate dikinase | PMI12_00984 | Not Available | Negative | 1002693 - 1004747 | 74510.3 |
| hypothetical protein | PMI12_00985 | Not Available | Positive | 1004891 - 1006816 | 71751.4 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component | PMI12_00986 | Not Available | Positive | 1006894 - 1008252 | 48274.9 |
| 2-dehydropantoate 2-reductase | PMI12_00987 | Not Available | Negative | 1008249 - 1009145 | 31072.6 |
| transcriptional regulator | PMI12_00988 | Not Available | Negative | 1009200 - 1010114 | 32778.6 |
| abc-type spermidine/putrescine transport system, permease component ii | PMI12_00989 | Not Available | Positive | 1010284 - 1011069 | 27581.3 |
| hypothetical protein | PMI12_00990 | Not Available | Positive | 1011066 - 1011332 | 9445.41 |
| abc-type spermidine/putrescine transport system, atpase component | PMI12_00991 | Not Available | Positive | 1011296 - 1012090 | 28921.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.