Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like serine protease with c-terminal pdz domain containing protein | PMI12_00063 | Not Available | + | 61904 - 63193 | 45053.2 |
| dnak suppressor protein | PMI12_00064 | Not Available | + | 63245 - 63619 | 13637.2 |
| hypothetical protein | PMI12_00065 | Not Available | - | 63861 - 64445 | 22578.3 |
| universal stress protein uspa-like protein | PMI12_00066 | Not Available | + | 64612 - 65118 | 18012.6 |
| hypothetical protein | PMI12_00067 | Not Available | - | 65123 - 66661 | 56354.8 |
| p-type atpase, translocating | PMI12_00068 | Not Available | - | 66678 - 69155 | 87179.3 |
| universal stress protein uspa-like protein | PMI12_00069 | Not Available | - | 69215 - 70057 | 30286.5 |
| fad/fmn-dependent dehydrogenase | PMI12_00070 | Not Available | - | 70168 - 71478 | 49426.3 |
| methyltransferase, cyclopropane fatty acid synthase | PMI12_00071 | Not Available | - | 71513 - 72736 | 46169.0 |
| hypothetical protein | PMI12_00072 | Not Available | - | 72744 - 72974 | 8450.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.