Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 4117593 - 4117605 | Not Available |
| Site-specific recombinase, phage integrase family | PMI12_03971 | Not Available | + | 4124509 - 4125132 | 23584.6 |
| Dna primase | PMI12_03972 | Not Available | + | 4125936 - 4127216 | 45063.9 |
| hypothetical protein | PMI12_03973 | Not Available | + | 4127248 - 4127421 | 6622.1 |
| moba/mobl family protein | PMI12_03974 | Not Available | + | 4127782 - 4128492 | 26698.8 |
| hypothetical protein | PMI12_03975 | Not Available | + | 4128682 - 4129071 | 14061.0 |
| Transposase | PMI12_03976 | Not Available | - | 4129542 - 4131113 | 58796.4 |
| Transposase | PMI12_03977 | Not Available | - | 4131171 - 4131533 | 13375.5 |
| Truncated transposase | PMI12_03978 | Not Available | - | 4131500 - 4131847 | 12342.9 |
| Chaperone protein dnaj | PMI12_03979 | Not Available | - | 4132100 - 4133212 | 41540.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.