Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase, family 3 | MSI_9480 | Not Available | Negative | 1103237 - 1105465 | 85149.7 |
| Trna-thr | Not Available | Not Available | Positive | 1105740 - 1105812 | Not Available |
| camp-binding protein | MSI_9500 | Not Available | Negative | 1105839 - 1107083 | 47018.7 |
| putative metal-dependent phosphoesterases (php family) | MSI_9510 | Not Available | Positive | 1107160 - 1108011 | 31534.9 |
| putative efflux protein, mate family | MSI_9520 | Not Available | Positive | 1108190 - 1109548 | 49614.2 |
| glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase | MSI_9530 | Not Available | Negative | 1109692 - 1111296 | 57110.8 |
| anthranilate/para-aminobenzoate synthases component i | MSI_9540 | Not Available | Negative | 1111446 - 1112939 | 55688.2 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | MSI_9550 | Not Available | Positive | 1113101 - 1114735 | 61283.5 |
| xylanase/chitin deacetylase | MSI_9560 | Not Available | Positive | 1114832 - 1115455 | 23353.0 |
| phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent | MSI_9570 | Not Available | Negative | 1115470 - 1116096 | 21994.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
