Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative s-adenosylmethionine-dependent methyltransferase involved in cell division | MSI_08970 | Not Available | Positive | 1040132 - 1040830 | 25047.5 |
| leucyl aminopeptidase (aminopeptidase t) | MSI_08980 | Not Available | Positive | 1040897 - 1042027 | 40942.8 |
| d-alanyl-d-alanine carboxypeptidase | MSI_08990 | Not Available | Positive | 1042024 - 1042821 | 30498.0 |
| abc-type sugar transport system, periplasmic component | MSI_09000 | Not Available | Positive | 1043049 - 1044338 | 47249.1 |
| abc-type sugar transport system, permease component | MSI_09010 | Not Available | Positive | 1044452 - 1045381 | 35039.6 |
| abc-type sugar transport system, permease component | MSI_09020 | Not Available | Positive | 1045381 - 1046235 | 31897.3 |
| beta-xylosidase | MSI_09030 | Not Available | Positive | 1046264 - 1047898 | 62231.0 |
| transcriptional regulator | MSI_09040 | Not Available | Positive | 1047907 - 1048923 | 37401.6 |
| d-xylulose kinase | MSI_09050 | Not Available | Positive | 1048940 - 1050463 | 54885.3 |
| hypothetical protein | MSI_09060 | Not Available | Positive | 1050575 - 1051222 | 23624.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
