Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate dehydrogenase (subfamily 1) family protein | MSI_08870 | Not Available | Positive | 1028781 - 1030577 | 62859.5 |
| hypothetical protein | MSI_08880 | Not Available | Negative | 1030765 - 1031190 | 15082.2 |
| phytoene dehydrogenase | MSI_08890 | Not Available | Negative | 1031302 - 1032783 | 55637.3 |
| response regulator | MSI_08900 | Not Available | Positive | 1032955 - 1034403 | 54928.9 |
| transcriptional regulator | MSI_08910 | Not Available | Positive | 1034445 - 1034930 | 18451.1 |
| aspartate/tyrosine/aromatic aminotransferase | MSI_08920 | Not Available | Positive | 1034976 - 1036145 | 43564.8 |
| restriction endonuclease | MSI_08930 | Not Available | Positive | 1036173 - 1037525 | 50379.0 |
| rna methyltransferase, rsme family | MSI_08940 | Not Available | Positive | 1037550 - 1038323 | 28229.4 |
| hypothetical protein | MSI_08950 | Not Available | Positive | 1038332 - 1039144 | 31110.1 |
| hypothetical protein | MSI_08960 | Not Available | Positive | 1039131 - 1040132 | 35543.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
