Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | MSI_08670 | Not Available | Positive | 1006419 - 1007768 | 47601.4 |
| adenine-specific dna methylase | MSI_08680 | Not Available | Positive | 1007765 - 1008943 | 44152.4 |
| putative extracellular nuclease | MSI_08690 | Not Available | Negative | 1009128 - 1010156 | 38490.8 |
| phosphoribosylanthranilate isomerase | MSI_08700 | Not Available | Positive | 1010306 - 1011832 | 55182.5 |
| tryptophan synthase, beta subunit | MSI_08710 | Not Available | Positive | 1011848 - 1013092 | 44754.7 |
| tryptophan synthase, alpha subunit | MSI_08720 | Not Available | Positive | 1013311 - 1014069 | 26539.0 |
| transcriptional regulator | MSI_08730 | Not Available | Positive | 1014431 - 1015444 | 37896.6 |
| lysophospholipase | MSI_08740 | Not Available | Negative | 1015441 - 1016487 | 39604.0 |
| orotidine 5''-phosphate decarboxylase, subfamily 2 | MSI_08750 | Not Available | Positive | 1016518 - 1017444 | 33528.1 |
| atp phosphoribosyltransferase | MSI_08760 | Not Available | Positive | 1017590 - 1018462 | 32511.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
