Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l28 | MSI_07650 | Not Available | Positive | 902051 - 902278 | 8437.41 |
| metal-dependent hydrolase of the beta-lactamase superfamily i | MSI_07660 | Not Available | Negative | 902354 - 903301 | 35629.9 |
| branched-chain amino acid abc-type transport system, permease component | MSI_07670 | Not Available | Positive | 903485 - 904369 | 31040.5 |
| abc-type branched-chain amino acid transport system, permease component | MSI_07680 | Not Available | Positive | 904381 - 905385 | 36047.5 |
| abc-type branched-chain amino acid transport system, atpase component | MSI_07690 | Not Available | Positive | 905385 - 906188 | 29856.5 |
| abc-type branched-chain amino acid transport system, atpase component | MSI_07700 | Not Available | Positive | 906182 - 906886 | 25625.2 |
| putative signal-transduction protein | MSI_07710 | Not Available | Positive | 906917 - 907561 | 23412.7 |
| hypothetical protein | MSI_07720 | Not Available | Positive | 907619 - 909085 | 55705.4 |
| phosphotransferase system mannitol/fructose-specific iia domain (ntr-type) | MSI_07730 | Not Available | Positive | 909097 - 909558 | 16518.2 |
| transketolase | MSI_07740 | Not Available | Positive | 909597 - 911573 | 71015.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
