Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s14 | MSI_07350 | Not Available | Positive | 877840 - 878025 | 7190.05 |
| ribosomal protein s8 | MSI_07360 | Not Available | Positive | 878035 - 878433 | 14570.8 |
| ribosomal protein l6, bacterial type | MSI_07370 | Not Available | Positive | 878446 - 878985 | 19248.6 |
| ribosomal protein l18, bacterial type | MSI_07380 | Not Available | Positive | 878997 - 879359 | 13476.5 |
| ribosomal protein s5, bacterial/organelle type | MSI_07390 | Not Available | Positive | 879369 - 879887 | 18374.4 |
| ribosomal protein l30, bacterial/organelle | MSI_07400 | Not Available | Positive | 879891 - 880070 | 6325.95 |
| ribosomal protein l15, bacterial/organelle | MSI_07410 | Not Available | Positive | 880072 - 880560 | 17155.4 |
| preprotein translocase, secy subunit | MSI_07420 | Not Available | Positive | 880576 - 881910 | 49056.5 |
| ribosomal protein l36, bacterial type | MSI_07430 | Not Available | Positive | 882053 - 882166 | 4305.52 |
| 30s ribosomal protein s13 | MSI_07440 | Not Available | Positive | 882177 - 882545 | 13762.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
