Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_00600 | Not Available | - | 61089 - 61769 | 24968.8 |
| o-methyltransferase | MSI_00610 | Not Available | - | 61786 - 62925 | 42106.2 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | MSI_00620 | Not Available | - | 62935 - 64212 | 44496.8 |
| hypothetical protein | MSI_00630 | Not Available | + | 64280 - 65359 | 41982.9 |
| pseudouridylate synthase, 23s rna-specific | MSI_00640 | Not Available | - | 65532 - 66884 | 50204.5 |
| ribose 5-phosphate isomerase | MSI_00650 | Not Available | - | 66888 - 67610 | 25973.4 |
| shikimate 5-dehydrogenase | MSI_00660 | Not Available | - | 67610 - 69106 | 56122.8 |
| hypothetical protein | MSI_00670 | Not Available | - | 69106 - 70287 | 43332.8 |
| methionyl-trna formyltransferase | MSI_00680 | Not Available | - | 70330 - 71283 | 34510.6 |
| peptide deformylase | MSI_00690 | Not Available | - | 71293 - 71868 | 21671.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
