Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | MSI_06330 | Not Available | Negative | 760901 - 762715 | 69283.6 |
| response regulator | MSI_06340 | Not Available | Negative | 762923 - 763669 | 28142.1 |
| signal transduction histidine kinase | MSI_06350 | Not Available | Negative | 763677 - 766739 | 116568.0 |
| ggdef domain-containing protein | MSI_06360 | Not Available | Negative | 766740 - 768125 | 52638.3 |
| putative na+dependent transporter | MSI_06370 | Not Available | Negative | 768444 - 769442 | 35383.7 |
| abc-type polar amino acid transport system, atpase component | MSI_06380 | Not Available | Negative | 769543 - 770307 | 28519.1 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | MSI_06390 | Not Available | Negative | 770311 - 771006 | 25873.8 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | MSI_06400 | Not Available | Negative | 771026 - 771679 | 24045.5 |
| abc-type amino acid transport/signal transduction system, periplasmic component | MSI_06410 | Not Available | Negative | 771721 - 772554 | 29741.6 |
| radical sam enzyme, tigr04100 family | MSI_06420 | Not Available | Positive | 772732 - 773367 | 23802.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
