Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_05630 | Not Available | Negative | 678249 - 678809 | 19851.3 |
| hypothetical protein | MSI_05640 | Not Available | Negative | 678827 - 679324 | 17923.0 |
| rna polymerase sigma factor, sigma-70 family | MSI_05650 | Not Available | Negative | 679453 - 679932 | 18417.8 |
| hypothetical protein | MSI_05660 | Not Available | Positive | 680076 - 681563 | 55733.8 |
| hypothetical protein | MSI_05670 | Not Available | Positive | 681560 - 682807 | 47007.0 |
| hypothetical protein | MSI_05680 | Not Available | Positive | 682817 - 684037 | 46067.0 |
| outer membrane protein | MSI_05690 | Not Available | Negative | 684058 - 685764 | 64524.4 |
| abc-type branched-chain amino acid transport system, periplasmic component | MSI_05700 | Not Available | Negative | 685768 - 687003 | 46628.4 |
| nhlm bacteriocin system abc transporter, atp-binding protein | MSI_05710 | Not Available | Negative | 687020 - 689683 | 99759.4 |
| nhlm bacteriocin system abc transporter, peptidase/atp-binding protein | MSI_05720 | Not Available | Negative | 689695 - 691896 | 81447.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
