Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s oxidoreductase | MSI_04730 | Not Available | Positive | 588194 - 589870 | 62251.9 |
| lysyl-trna synthetase (archaeal and spirochete) | MSI_04740 | Not Available | Positive | 589922 - 592126 | 83107.5 |
| uridine phosphorylase | MSI_04750 | Not Available | Negative | 592284 - 593069 | 27951.6 |
| dsrna-specific ribonuclease | MSI_04760 | Not Available | Negative | 593097 - 594113 | 38794.8 |
| beta-glucosidase | MSI_04770 | Not Available | Positive | 594211 - 596703 | 91201.2 |
| cobyrinic acid a,c-diamide synthase | MSI_04780 | Not Available | Negative | 596787 - 598457 | 62293.6 |
| precorrin-6y c5,15-methyltransferase (decarboxylating), cbit subunit | MSI_04790 | Not Available | Negative | 598457 - 599050 | 21645.3 |
| precorrin-6x reductase | MSI_04800 | Not Available | Negative | 599047 - 600552 | 54991.0 |
| precorrin-3b c17-methyltransferase | MSI_04810 | Not Available | Negative | 600549 - 601295 | 26763.6 |
| cobalamin biosynthesis protein cbig | MSI_04820 | Not Available | Negative | 601297 - 602355 | 39057.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
