Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_04130 | Not Available | Positive | 518870 - 519793 | 35632.7 |
| clostripain family | MSI_04140 | Not Available | Negative | 519794 - 521401 | 60341.1 |
| hypothetical protein | MSI_04150 | Not Available | Negative | 521508 - 521810 | 11383.3 |
| hypothetical protein | MSI_04160 | Not Available | Negative | 521865 - 523388 | 56330.2 |
| haloacid dehalogenase superfamily, subfamily ia, variant 1 | MSI_04170 | Not Available | Positive | 523575 - 524264 | 25870.0 |
| hypothetical protein | MSI_04180 | Not Available | Positive | 524303 - 528670 | 166599.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | MSI_04190 | Not Available | Positive | 528674 - 529147 | 17277.0 |
| 4-diphosphocytidyl-2-methyl-d-erithritol synthase | MSI_04200 | Not Available | Negative | 529162 - 529902 | 26800.3 |
| transcriptional regulator card | MSI_04210 | Not Available | Negative | 529862 - 530539 | 25641.8 |
| hypothetical protein | MSI_04220 | Not Available | Negative | 530877 - 532142 | 45139.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
