Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 443167 - 443240 | Not Available |
| 1,4-alpha-glucan branching enzyme | MSI_03530 | Not Available | Negative | 443367 - 443759 | 14366.0 |
| 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase | MSI_03540 | Not Available | Negative | 444036 - 444467 | 16041.5 |
| 5'' nucleotidase, deoxy (pyrimidine), cytosolic type c protein | MSI_03550 | Not Available | Negative | 444552 - 445148 | 23370.7 |
| beta-ketoacyl-acyl-carrier-protein synthase ii | MSI_03560 | Not Available | Negative | 445402 - 446655 | 43792.5 |
| 3-oxoacyl-(acyl-carrier-protein) reductase | MSI_03570 | Not Available | Negative | 446977 - 447726 | 26043.5 |
| (acyl-carrier-protein) s-malonyltransferase | MSI_03580 | Not Available | Negative | 447741 - 448700 | 34287.9 |
| ankyrin repeat-containing protein | MSI_03590 | Not Available | Negative | 449033 - 451807 | 100099.0 |
| putative membrane protein | MSI_03600 | Not Available | Positive | 451902 - 452792 | 31456.9 |
| trp operon repressor | MSI_03610 | Not Available | Negative | 452799 - 453125 | 12659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
