Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | MSI_03120 | Not Available | Negative | 379944 - 381404 | 54676.2 |
| pyridoxal/pyridoxine/pyridoxamine kinase | MSI_03130 | Not Available | Positive | 381491 - 382330 | 30449.5 |
| hypothetical protein | MSI_03140 | Not Available | Positive | 382436 - 382900 | 16565.3 |
| hypothetical protein | MSI_03150 | Not Available | Negative | 382976 - 383365 | 14652.2 |
| response regulator | MSI_03160 | Not Available | Negative | 383465 - 384079 | 23283.0 |
| histidine kinase | MSI_03170 | Not Available | Negative | 384094 - 386013 | 72244.4 |
| hypothetical protein | MSI_03180 | Not Available | Negative | 386112 - 387662 | 56876.6 |
| leucyl-trna synthetase | MSI_03190 | Not Available | Positive | 388094 - 390646 | 96569.2 |
| hypothetical protein | MSI_03200 | Not Available | Negative | 390632 - 393769 | 116736.0 |
| 5''-nucleotidase/2'',3''-cyclic phosphodiesterase | MSI_03210 | Not Available | Positive | 393800 - 395455 | 60028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
