Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_02600 | Not Available | Positive | 314722 - 316950 | 84680.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | MSI_02610 | Not Available | Negative | 316947 - 318230 | 46206.5 |
| peptidase t | MSI_02620 | Not Available | Negative | 318325 - 319581 | 46357.1 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_02630 | Not Available | Positive | 319653 - 321617 | 74771.2 |
| outer membrane protein (peptidoglycan-associated (lipo)protein) | MSI_02640 | Not Available | Negative | 321707 - 323065 | 50972.9 |
| peptidoglycan lyase | MSI_02650 | Not Available | Negative | 323081 - 324193 | 42438.2 |
| hypothetical protein | MSI_02660 | Not Available | Negative | 324218 - 324718 | 19476.7 |
| adenine phosphoribosyltransferase | MSI_02690 | Not Available | Positive | 326257 - 326787 | 19232.6 |
| aspartate--ammonia ligase, asna-type | MSI_02700 | Not Available | Positive | 326800 - 327831 | 39163.2 |
| hypothetical protein | MSI_02710 | Not Available | Positive | 327858 - 328844 | 37324.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
