Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type mn/zn transport system, permease component | MSI_02300 | Not Available | Negative | 285445 - 286281 | 29494.2 |
| abc-type mn/zn transport system, atpase component | MSI_02310 | Not Available | Negative | 286278 - 286973 | 26073.0 |
| arginyl-trna synthetase | MSI_02320 | Not Available | Positive | 287090 - 288913 | 67258.5 |
| histidinol-phosphate aminotransferase | MSI_02330 | Not Available | Positive | 288914 - 290074 | 42960.3 |
| hypothetical protein | MSI_02340 | Not Available | Positive | 290055 - 291857 | 70128.1 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_02350 | Not Available | Positive | 291812 - 293227 | 55057.9 |
| putative icc phosphoesterase family protein | MSI_02360 | Not Available | Positive | 293257 - 293946 | 25078.5 |
| putative gtpase (g3e family) | MSI_02370 | Not Available | Negative | 293992 - 295248 | 47809.8 |
| hypothetical protein | MSI_02380 | Not Available | Negative | 295394 - 295954 | 20593.8 |
| hypothetical protein | MSI_02390 | Not Available | Negative | 295956 - 297950 | 75678.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
