Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aerobic-type carbon monoxide dehydrogenase, middle subunit | MSI_24440 | Not Available | Negative | 2752332 - 2753129 | 29334.6 |
| aerobic-type carbon monoxide dehydrogenase, small subunit | MSI_24450 | Not Available | Negative | 2753129 - 2753626 | 18207.6 |
| aerobic-type carbon monoxide dehydrogenase, large subunit | MSI_24460 | Not Available | Negative | 2753623 - 2755857 | 83152.2 |
| putative pyridoxal phosphate-dependent enzyme involved in regulation of cell wall biogenesis | MSI_24470 | Not Available | Negative | 2755883 - 2757154 | 47698.2 |
| hypothetical protein | MSI_24480 | Not Available | Positive | 2757258 - 2757755 | 18396.0 |
| hypothetical protein | MSI_24500 | Not Available | Negative | 2758981 - 2760153 | 43417.8 |
| pseudouridylate synthase, 23s rna-specific | MSI_24510 | Not Available | Positive | 2760183 - 2760833 | 24096.5 |
| dtdp-d-glucose 4,6-dehydratase | MSI_24520 | Not Available | Positive | 2761235 - 2761981 | 28706.8 |
| integral membrane protein ccma involved in cell shape determination | MSI_24530 | Not Available | Positive | 2761997 - 2762362 | 13348.1 |
| tetratricopeptide repeat-containing protein | MSI_24540 | Not Available | Positive | 2762366 - 2762989 | 23757.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
