Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin carboxylase | MSI_23990 | Not Available | Negative | 2707690 - 2708235 | 21433.1 |
| hypothetical protein | MSI_24000 | Not Available | Negative | 2708400 - 2708819 | 16147.6 |
| sugar transferase involved in lipopolysaccharide synthesis | MSI_24010 | Not Available | Negative | 2708842 - 2709453 | 23990.8 |
| hypothetical protein | MSI_24020 | Not Available | Negative | 2709454 - 2710125 | 24617.7 |
| lactoylglutathione lyase | MSI_24030 | Not Available | Negative | 2710162 - 2710515 | 13565.2 |
| putative nucleoside-diphosphate sugar epimerase | MSI_24040 | Not Available | Negative | 2710515 - 2712338 | 68349.9 |
| atpase | MSI_24060 | Not Available | Negative | 2713252 - 2714793 | 59766.4 |
| hypothetical protein | MSI_24070 | Not Available | Positive | 2714926 - 2715786 | 32210.8 |
| 5'' nucleotidase, deoxy (pyrimidine) | MSI_24080 | Not Available | Positive | 2715786 - 2716385 | 23804.1 |
| arabinogalactan endo-1,4-beta-galactosidase | MSI_24090 | Not Available | Negative | 2716459 - 2717631 | 43071.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
