Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | MSI_23440 | Not Available | Negative | 2654366 - 2656204 | 71267.1 |
| dna primase, catalytic core | MSI_23450 | Not Available | Negative | 2656215 - 2658017 | 68119.4 |
| hypothetical protein, yceg family | MSI_23460 | Not Available | Negative | 2658039 - 2658785 | 27781.0 |
| hypothetical protein | MSI_23470 | Not Available | Negative | 2658878 - 2659090 | 8090.25 |
| hypothetical protein | MSI_23480 | Not Available | Negative | 2659087 - 2659275 | 7244.54 |
| metal-dependent hydrolases of the beta-lactamase superfamily i | MSI_23490 | Not Available | Negative | 2659272 - 2660210 | 35933.5 |
| Trna-tyr | Not Available | Not Available | Positive | 2660332 - 2660413 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2660421 - 2660493 | Not Available |
| asparaginyl-trna synthetase | MSI_23540 | Not Available | Positive | 2662486 - 2663946 | 54817.5 |
| ferrous iron transporter feob | MSI_23550 | Not Available | Negative | 2664146 - 2666527 | 86756.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
