Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_22560 | Not Available | Negative | 2561147 - 2561347 | 7608.76 |
| alpha-galactosidase | MSI_22570 | Not Available | Negative | 2561337 - 2562866 | 58990.1 |
| 23s rrna methyltransferase | MSI_22580 | Not Available | Negative | 2562997 - 2564025 | 37510.8 |
| tetratricopeptide repeat-containing protein | MSI_22590 | Not Available | Negative | 2564040 - 2565185 | 44836.3 |
| hypothetical protein | MSI_22600 | Not Available | Negative | 2565237 - 2565593 | 13609.3 |
| rna methyltransferase, rsmd family | MSI_22610 | Not Available | Negative | 2565676 - 2566224 | 20774.4 |
| hypothetical protein | MSI_22620 | Not Available | Negative | 2566371 - 2568035 | 63475.5 |
| ribosomal protein s6 | MSI_22630 | Not Available | Positive | 2568320 - 2568607 | 11142.4 |
| single stranded dna-binding protein (ssb) | MSI_22640 | Not Available | Positive | 2568639 - 2569124 | 17657.4 |
| ribosomal protein s18 | MSI_22650 | Not Available | Positive | 2569150 - 2569461 | 11882.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
