Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soluble lytic murein transglycosylase | MSI_22460 | Not Available | Negative | 2548931 - 2551156 | 84348.7 |
| hypothetical protein | MSI_22470 | Not Available | Negative | 2551186 - 2553384 | 80719.6 |
| rubrerythrin | MSI_22480 | Not Available | Positive | 2553387 - 2553926 | 20311.8 |
| 3-isopropylmalate dehydratase, small subunit | MSI_22490 | Not Available | Negative | 2554100 - 2554633 | 19951.0 |
| 3-isopropylmalate dehydratase, large subunit | MSI_22500 | Not Available | Negative | 2554721 - 2556004 | 46675.2 |
| lactate dehydrogenase | MSI_22510 | Not Available | Negative | 2556135 - 2557079 | 34368.4 |
| heavy-metal-associated domain-containing protein | MSI_22520 | Not Available | Negative | 2557121 - 2557324 | 6646.9 |
| sugar (glycoside-pentoside-hexuronide) transporter | MSI_22530 | Not Available | Negative | 2557480 - 2558964 | 54287.6 |
| transcriptional regulator | MSI_22540 | Not Available | Negative | 2558988 - 2559614 | 23863.7 |
| hypothetical protein | MSI_22550 | Not Available | Negative | 2559691 - 2561163 | 55099.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
