Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_22360 | Not Available | Negative | 2540500 - 2540724 | 8608.42 |
| hypothetical protein | MSI_22370 | Not Available | Negative | 2540876 - 2542102 | 48207.6 |
| putative transcriptional regulator | MSI_22380 | Not Available | Negative | 2542327 - 2543991 | 62159.5 |
| putative transcriptional regulator | MSI_22390 | Not Available | Negative | 2544101 - 2544916 | 30759.0 |
| site-specific recombinase xerd | MSI_22400 | Not Available | Negative | 2544929 - 2546266 | 51777.0 |
| Trna-met | Not Available | Not Available | Positive | 2546397 - 2546469 | Not Available |
| hypothetical protein | MSI_22420 | Not Available | Negative | 2546493 - 2547167 | 25494.2 |
| shikimate kinase | MSI_22430 | Not Available | Positive | 2547247 - 2547807 | 20803.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase 2 | MSI_22440 | Not Available | Negative | 2547861 - 2548388 | 18444.7 |
| thioredoxin-like protein | MSI_22450 | Not Available | Negative | 2548416 - 2548685 | 9762.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
