Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase, homotetrameric | MSI_22150 | Not Available | Positive | 2518687 - 2519130 | 16240.6 |
| hypothetical protein | MSI_22160 | Not Available | Positive | 2519127 - 2519351 | 7887.82 |
| atp-dependent dna helicase, recq family | MSI_22170 | Not Available | Negative | 2519299 - 2520771 | 55136.3 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_22180 | Not Available | Positive | 2521002 - 2522672 | 63468.2 |
| outer membrane protein | MSI_22190 | Not Available | Negative | 2522669 - 2523913 | 46353.7 |
| hypothetical protein | MSI_22200 | Not Available | Negative | 2523964 - 2524647 | 26211.9 |
| spermidine/putrescine-binding periplasmic protein | MSI_22210 | Not Available | Negative | 2524729 - 2525775 | 40002.5 |
| abc-type spermidine/putrescine transport system, permease component ii | MSI_22220 | Not Available | Negative | 2525879 - 2526757 | 32524.6 |
| abc-type spermidine/putrescine transport system, permease component i | MSI_22230 | Not Available | Negative | 2526757 - 2527665 | 34267.1 |
| abc-type spermidine/putrescine transport system, atpase component | MSI_22240 | Not Available | Negative | 2527787 - 2528977 | 44502.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
