Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superfamily ii dna/rna helicase | MSI_21920 | Not Available | Negative | 2482910 - 2485621 | 103814.0 |
| hypothetical protein | MSI_21950 | Not Available | Positive | 2488091 - 2488414 | 12620.7 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_21960 | Not Available | Positive | 2488552 - 2490378 | 70788.6 |
| acetylglutamate kinase | MSI_21970 | Not Available | Negative | 2490479 - 2491372 | 32166.5 |
| glutamate n-acetyltransferase/amino-acid acetyltransferase | MSI_21980 | Not Available | Negative | 2491375 - 2492652 | 45060.8 |
| excinuclease abc, c subunit | MSI_21990 | Not Available | Negative | 2492746 - 2494860 | 79030.1 |
| fibronectin type iii domain-containing protein | MSI_22000 | Not Available | Positive | 2494865 - 2496400 | 56256.8 |
| tetratricopeptide repeat-containing protein | MSI_22010 | Not Available | Positive | 2496483 - 2499500 | 111690.0 |
| xaa-pro aminopeptidase | MSI_22020 | Not Available | Negative | 2499512 - 2500660 | 43053.3 |
| integral membrane protein mvin | MSI_22030 | Not Available | Negative | 2500679 - 2502292 | 59081.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
