Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhad | MSI_21170 | Not Available | Positive | 2404863 - 2406218 | 48376.0 |
| hypothetical protein | MSI_21180 | Not Available | Positive | 2406231 - 2406839 | 23105.5 |
| atp-dependent exodnase (exonuclease v) beta subunit | MSI_21190 | Not Available | Negative | 2406988 - 2410602 | 136809.0 |
| d-alanine-d-alanine ligase | MSI_21210 | Not Available | Positive | 2411060 - 2412049 | 37480.3 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_21220 | Not Available | Negative | 2412041 - 2415142 | 119242.0 |
| hypothetical protein | MSI_21230 | Not Available | Negative | 2415168 - 2415377 | 8015.35 |
| thiamine pyrophosphokinase | MSI_21240 | Not Available | Negative | 2415381 - 2416043 | 24442.9 |
| putative protein involved in methicillin resistance | MSI_21250 | Not Available | Negative | 2416077 - 2417375 | 49561.0 |
| methionyl-trna synthetase | MSI_21260 | Not Available | Negative | 2417377 - 2419683 | 87044.9 |
| abc-type fe3+ transport system, periplasmic component | MSI_21270 | Not Available | Positive | 2419949 - 2420950 | 36452.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
